ENSDARG00000043960


Danio rerio

Features
Gene ID: ENSDARG00000043960
  
Biological name :rpf2
  
Synonyms : ribosome production factor 2 homolog / rpf2
  
Possible biological names infered from orthology : Q9H7B2 / Q9JJ80
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 150890
Gene end: 154989
  
Corresponding Affymetrix probe sets: Dr.6147.1.A1_at (Zebrafish Array)   NM_214748_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000064541
NCBI entrez gene - 406587     See in Manteia.
RefSeq - NM_214748
RefSeq Peptide - NP_999913
swissprot - Q6P0C5
ZFIN ID - ZDB-GENE-040426-2501
Ensembl - ENSDARG00000043960
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPF2ENSGALG00000037087Gallus gallus
 RPF2ENSG00000197498Homo sapiens
 Rpf2ENSMUSG00000038510Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007109  Brix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0019843 rRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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