ENSMUSG00000038510


Mus musculus

Features
Gene ID: ENSMUSG00000038510
  
Biological name :Rpf2
  
Synonyms : Q9JJ80 / ribosome production factor 2 homolog / Rpf2
  
Possible biological names infered from orthology : Q9H7B2
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: B1
Gene start: 40223246
Gene end: 40247036
  
Corresponding Affymetrix probe sets: 10368730 (MoGene1.0st)   1421945_a_at (Mouse Genome 430 2.0 Array)   1425884_at (Mouse Genome 430 2.0 Array)   1444666_at (Mouse Genome 430 2.0 Array)   1450423_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000138581
Ensembl peptide - ENSMUSP00000035456
Ensembl peptide - ENSMUSP00000138425
Ensembl peptide - ENSMUSP00000138646
Ensembl peptide - ENSMUSP00000138750
NCBI entrez gene - 67239     See in Manteia.
MGI - MGI:1914489
RefSeq - XM_006512828
RefSeq - NM_001042556
RefSeq - NM_023323
RefSeq Peptide - NP_001036021
RefSeq Peptide - NP_075812
swissprot - Q9JJ80
swissprot - S4R1Y5
swissprot - S4R2H5
swissprot - S4R2R2
swissprot - G3X926
Ensembl - ENSMUSG00000038510
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpf2ENSDARG00000043960Danio rerio
 RPF2ENSGALG00000037087Gallus gallus
 RPF2ENSG00000197498Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007109  Brix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IEA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator IEA
 biological_processGO:1902570 protein localization to nucleolus IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISS
 molecular_functionGO:0008097 5S rRNA binding IEA
 molecular_functionGO:0019843 rRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr