ENSG00000197498


Homo sapiens

Features
Gene ID: ENSG00000197498
  
Biological name :RPF2
  
Synonyms : Q9H7B2 / ribosome production factor 2 homolog / RPF2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q21
Gene start: 110982015
Gene end: 111028263
  
Corresponding Affymetrix probe sets: 225866_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357857
Ensembl peptide - ENSP00000402338
Ensembl peptide - ENSP00000414026
Ensembl peptide - ENSP00000476081
NCBI entrez gene - 84154     See in Manteia.
RefSeq - NM_032194
RefSeq - NM_001289111
RefSeq Peptide - NP_001276040
RefSeq Peptide - NP_115570
swissprot - Q5VXM9
swissprot - Q5VXN0
swissprot - Q9H7B2
swissprot - U3KQN5
Ensembl - ENSG00000197498
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpf2ENSDARG00000043960Danio rerio
 RPF2ENSGALG00000037087Gallus gallus
 Rpf2ENSMUSG00000038510Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007109  Brix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IMP
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator IMP
 biological_processGO:1902570 protein localization to nucleolus IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0008097 5S rRNA binding IDA
 molecular_functionGO:0019843 rRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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