ENSDARG00000044056


Danio rerio

Features
Gene ID: ENSDARG00000044056
  
Biological name :ahi1
  
Synonyms : Abelson helper integration site 1 / ahi1
  
Possible biological names infered from orthology : Q8N157
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 8229868
Gene end: 8268406
  
Corresponding Affymetrix probe sets: Dr.15946.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124018
Ensembl peptide - ENSDARP00000124155
Ensembl peptide - ENSDARP00000064667
NCBI entrez gene - 562701     See in Manteia.
RefSeq - NM_001319989
RefSeq Peptide - NP_001306918
swissprot - F8W3V6
swissprot - F1QX08
swissprot - F8W4S4
ZFIN ID - ZDB-GENE-060803-1
Ensembl - ENSDARG00000044056
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AHI1ENSGALG00000013951Gallus gallus
 AHI1ENSG00000135541Homo sapiens
 Ahi1ENSMUSG00000019986Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wdr44 / WD repeat domain 44 / Q5JSH3*ENSDARG0000006024911


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0035845 photoreceptor cell outer segment organization IMP
 biological_processGO:0044458 motile cilium assembly IMP
 biological_processGO:0071599 otic vesicle development IMP
 cellular_componentGO:0005622 intracellular IBA


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle lacks all parts of type ciliated epithelial cell cilium, abnormal
Show

 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000051 otic vesicle otic vesicle morphology , abnormal
Show

 ZFA:0000107 eye eye malformed , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
heart bilateral symmetry , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct lacks parts or has fewer parts of type ciliated epithelial cell cilium, abnormal
pronephric duct cilium assembly decreased occurrence , abnormal
Show

 ZFA:0000151 pronephros pronephros dilated , abnormal
pronephros cystic , abnormal
Show

 ZFA:0000217 inner ear inner ear has fewer parts of type otolith , abnormal
inner ear lacks all parts of type otolith , abnormal
Show

 ZFA:0001094 whole organism whole organism anatomical axis curved , abnormal
whole organism lacks all parts of type swim bladder , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curled , abnormal
post-vent region curved ventral , abnormal
Show

 ZFA:0001464 retinal outer nuclear layer retinal outer nuclear layer mislocalised , abnormal
retinal outer nuclear layer dorsal region decreased thickness , abnormal
Show

 ZFA:0001466 photoreceptor outer segment layer photoreceptor outer segment layer dorsal region malformed , abnormal
Show

 ZFA:0001623 posterior pronephric duct posterior pronephric duct lacks all parts of type posterior pronephric duct motile cilium, abnormal
Show

 ZFA:0009154 eye photoreceptor cell eye photoreceptor cell photoreceptor connecting cilium decreased amount , abnormal
Show

 ZFA:0009262 retinal cone cell retinal cone cell photoreceptor outer segment irregular spatial pattern , abnormal
retinal cone cell photoreceptor outer segment decreased length , abnormal
retinal cone cell photoreceptor outer segment disorganized , abnormal
retinal cone cell photoreceptor cell outer segment organization decreased process quality , abnormal
retinal cone cell photoreceptor disc membrane irregular spatial pattern , abnormal
retinal cone cell lacks all parts of type retinal cone cell photoreceptor outer segment, abnormal
retinal cone cell has fewer parts of type retinal cone cell photoreceptor outer segment, abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr