ENSG00000135541


Homo sapiens

Features
Gene ID: ENSG00000135541
  
Biological name :AHI1
  
Synonyms : Abelson helper integration site 1 / AHI1 / Q8N157
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q23.3
Gene start: 135283532
Gene end: 135497776
  
Corresponding Affymetrix probe sets: 220841_s_at (Human Genome U133 Plus 2.0 Array)   220842_at (Human Genome U133 Plus 2.0 Array)   221569_at (Human Genome U133 Plus 2.0 Array)   232461_at (Human Genome U133 Plus 2.0 Array)   244699_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000435710
Ensembl peptide - ENSP00000434697
Ensembl peptide - ENSP00000436071
Ensembl peptide - ENSP00000436516
Ensembl peptide - ENSP00000265602
Ensembl peptide - ENSP00000322478
Ensembl peptide - ENSP00000356773
Ensembl peptide - ENSP00000356774
Ensembl peptide - ENSP00000388650
Ensembl peptide - ENSP00000432167
Ensembl peptide - ENSP00000433017
Ensembl peptide - ENSP00000433063
Ensembl peptide - ENSP00000433864
NCBI entrez gene - 54806     See in Manteia.
OMIM - 608894
RefSeq - XM_017010984
RefSeq - NM_001134831
RefSeq - NM_001134832
RefSeq - NM_001350503
RefSeq - NM_017651
RefSeq - XM_011535910
RefSeq - XM_011535911
RefSeq - XM_017010977
RefSeq - XM_017010978
RefSeq - XM_017010979
RefSeq - XM_017010980
RefSeq - XM_017010981
RefSeq - XM_017010982
RefSeq - XM_017010983
RefSeq - NM_001134830
RefSeq Peptide - NP_001128304
RefSeq Peptide - NP_001337432
RefSeq Peptide - NP_060121
RefSeq Peptide - NP_001128302
RefSeq Peptide - NP_001128303
swissprot - E9PI51
swissprot - E9PML3
swissprot - Q8N157
swissprot - Q9NQN3
swissprot - H0Y343
swissprot - H0YDL1
swissprot - H0YE01
swissprot - H0YEF1
Ensembl - ENSG00000135541
  
Related genetic diseases (OMIM): 608629 - Joubert syndrome 3, 608629
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ahi1ENSDARG00000044056Danio rerio
 AHI1ENSGALG00000013951Gallus gallus
 Ahi1ENSMUSG00000019986Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WDR44 / Q5JSH3 / WD repeat domain 44ENSG0000013172513


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR035832  Jouberin, SH3 domain
 IPR036028  SH3-like domain superfamily
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001738 morphogenesis of a polarized epithelium ISS
 biological_processGO:0001947 heart looping ISS
 biological_processGO:0002092 positive regulation of receptor internalization ISS
 biological_processGO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway ISS
 biological_processGO:0007417 central nervous system development ISS
 biological_processGO:0010842 retina layer formation ISS
 biological_processGO:0016192 vesicle-mediated transport ISS
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030862 positive regulation of polarized epithelial cell differentiation ISS
 biological_processGO:0030902 hindbrain development ISS
 biological_processGO:0034613 cellular protein localization ISS
 biological_processGO:0035844 cloaca development ISS
 biological_processGO:0035845 photoreceptor cell outer segment organization ISS
 biological_processGO:0039008 pronephric nephron tubule morphogenesis ISS
 biological_processGO:0039023 pronephric duct morphogenesis ISS
 biological_processGO:0043066 negative regulation of apoptotic process ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0050795 regulation of behavior ISS
 biological_processGO:0060271 cilium assembly IBA
 biological_processGO:0065001 specification of axis polarity ISS
 biological_processGO:0070121 Kupffer"s vesicle development ISS
 biological_processGO:0070986 left/right axis specification ISS
 biological_processGO:0071599 otic vesicle development ISS
 biological_processGO:0097711 ciliary basal body-plasma membrane docking TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005911 cell-cell junction IDA
 cellular_componentGO:0005912 adherens junction IEA
 cellular_componentGO:0005929 cilium ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0036038 MKS complex ISS
 cellular_componentGO:0036064 ciliary basal body IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0097730 non-motile cilium ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000090 Nephronophthisis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000194 Open mouth 
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 HP:0000202 Cleft lip/palate 
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 HP:0000238 Hydrocephalus 
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 HP:0000276 Long face 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000426 Prominent nasal bridge 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000480 Retinal coloboma 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000556 Retinal dystrophy 
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000572 Visual loss 
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000602 Ophthalmoplegia 
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 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000657 Oculomotor apraxia 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000864 Abnormality of the hypothalamus-pituitary axis 
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 HP:0000987 Scarring 
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 HP:0001161 Polydactyly (hands) 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001320 Cerebellar vermis hypoplasia 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001651 Dextrocardia "A left-right reversal (or "mirror reflection") of the anatomical location of the heart in which the heart is locate on the right side in stead of the left." [HPO:sdoelken]
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 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
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 HP:0001829 Polydactyly (feet) 
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 HP:0002084 Encephalocele 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
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 HP:0002419 Molar tooth sign on MRI 
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 HP:0002553 Arched eyebrows 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002790 Neonatal breathing dysregulation 
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 HP:0002871 Central apnea "Apnea resulting from depression of the respiratory centers in the medulla oblongata. There is a lack of respiratory effort rather than obstruction of airflow." [HPO:curators]
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 HP:0002876 Tachypnea, episodic 
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 HP:0003312 Abnormal form of the vertebral bodies 
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 HP:0003468 Abnormalities of the vertebrae 
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 HP:0003774 End stage renal disease 
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 HP:0004422 Biparietal narrowing "A narrowing of the biparietal diameter (i.e., of the transverse distance between the protuberances of the two parietal bones of the skull)." [HPO:curators]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008872 Feeding problems in infancy 
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 HP:0011933 Elongated superior cerebellar peduncle "Increased length of the `superior cerebellar peduncle` (FMA:72495)." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0100951 Enlarged fossa interpeduncularis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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