ENSDARG00000044102


Danio rerio

Features
Gene ID: ENSDARG00000044102
  
Biological name :znf593
  
Synonyms : zinc finger protein 593 / znf593
  
Possible biological names infered from orthology : O00488 / Q9DB42 / Zfp593
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 24684778
Gene end: 24686816
  
Corresponding Affymetrix probe sets: Dr.18052.1.S1_at (Zebrafish Array)   NM_200817_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120578
Ensembl peptide - ENSDARP00000076674
NCBI entrez gene - 559352     See in Manteia.
RefSeq - NM_200817
RefSeq Peptide - NP_957111
swissprot - E7FCM9
ZFIN ID - ZDB-GENE-040426-1789
Ensembl - ENSDARG00000044102
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF593ENSGALG00000000542Gallus gallus
 O00488ENSG00000142684Homo sapiens
 Q9DB42ENSMUSG00000028840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR022755  Zinc finger, double-stranded RNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043023 ribosomal large subunit binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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