ENSMUSG00000028840


Mus musculus

Features
Gene ID: ENSMUSG00000028840
  
Biological name :Zfp593
  
Synonyms : Q9DB42 / Zfp593 / zinc finger protein 593
  
Possible biological names infered from orthology : O00488 / ZNF593
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D3
Gene start: 134243289
Gene end: 134245592
  
Corresponding Affymetrix probe sets: 10517236 (MoGene1.0st)   1447703_x_at (Mouse Genome 430 2.0 Array)   1449946_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030644
NCBI entrez gene - 68040     See in Manteia.
MGI - MGI:1915290
RefSeq - NM_024215
RefSeq Peptide - NP_077177
swissprot - Q9DB42
Ensembl - ENSMUSG00000028840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf593ENSDARG00000044102Danio rerio
 ZNF593ENSGALG00000000542Gallus gallus
 O00488ENSG00000142684Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:1903026 negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding ISO
 molecular_functionGO:0043023 ribosomal large subunit binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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