ENSGALG00000000542


Gallus gallus

Features
Gene ID: ENSGALG00000000542
  
Biological name :ZNF593
  
Synonyms : zinc finger protein 593 / ZNF593
  
Possible biological names infered from orthology : O00488 / Q9DB42 / Zfp593
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 242519
Gene end: 243718
  
Corresponding Affymetrix probe sets: Gga.4525.1.S1_s_at (Chicken Array)   Gga.4525.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000748
NCBI entrez gene - 419549     See in Manteia.
RefSeq - NM_001006307
RefSeq Peptide - NP_001006307
swissprot - Q5ZIT0
Ensembl - ENSGALG00000000542
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf593ENSDARG00000044102Danio rerio
 O00488ENSG00000142684Homo sapiens
 Q9DB42ENSMUSG00000028840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR022755  Zinc finger, double-stranded RNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:1903026 negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043023 ribosomal large subunit binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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