ENSDARG00000044167


Danio rerio

Features
Gene ID: ENSDARG00000044167
  
Biological name :padi2
  
Synonyms : padi2 / peptidyl arginine deiminase, type II
  
Possible biological names infered from orthology : peptidyl arginine deiminase 2 / Protein-arginine deiminase type-2 / Q08642 / Q9Y2J8
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 47843760
Gene end: 47865858
  
Corresponding Affymetrix probe sets: Dr.8670.1.A1_at (Zebrafish Array)   NM_200112_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000064841
Ensembl peptide - ENSDARP00000123120
NCBI entrez gene - 386792     See in Manteia.
RefSeq - NM_200112
RefSeq Peptide - NP_956406
swissprot - F1QTZ4
swissprot - E9QD83
ZFIN ID - ZDB-GENE-031116-67
Ensembl - ENSDARG00000044167
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PADI2ENSGALG00000029212Gallus gallus
 PADI2ENSG00000117115Homo sapiens
 Padi2ENSMUSG00000028927Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004303  Protein-arginine deiminase
 IPR008972  Cupredoxin
 IPR013530  Protein-arginine deiminase, C-terminal
 IPR013732  Protein-arginine deiminase (PAD) N-terminal
 IPR013733  Protein-arginine deiminase (PAD), central domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001944 vasculature development IMP
 biological_processGO:0018101 protein citrullination IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004668 protein-arginine deiminase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Chromatin modifying enzymes
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001267 cranial vasculature cranial vasculature morphology , abnormal
cranial vasculature decreased amount , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel morphology , abnormal
intersegmental vessel spatial pattern , abnormal
intersegmental vessel malformed , abnormal
intersegmental vessel decreased amount , abnormal
Show

 ZFA:0007057 ocular blood vessel ocular blood vessel morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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