ENSDARG00000044182


Danio rerio

Features
Gene ID: ENSDARG00000044182
  
Biological name :stau1
  
Synonyms : stau1 / staufen double-stranded RNA binding protein 1
  
Possible biological names infered from orthology : O95793 / Q9Z108
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 46431848
Gene end: 46454823
  
Corresponding Affymetrix probe sets: Dr.7422.1.A1_at (Zebrafish Array)   NM_205561_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000148866
Ensembl peptide - ENSDARP00000064864
Ensembl peptide - ENSDARP00000113751
Ensembl peptide - ENSDARP00000116967
NCBI entrez gene - 334440     See in Manteia.
RefSeq - NM_205561
RefSeq - XM_005168759
RefSeq - XM_005168761
RefSeq Peptide - NP_991124
swissprot - F1Q5V4
swissprot - E9QIB8
swissprot - F1QTC1
ZFIN ID - ZDB-GENE-030131-6372
Ensembl - ENSDARG00000044182
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STAU1ENSGALG00000004736Gallus gallus
 STAU1ENSG00000124214Homo sapiens
 Stau1ENSMUSG00000039536Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stau2 / staufen double-stranded RNA binding protein 2 / Q8CJ67* / Q9NUL3*ENSDARG0000002680142


Protein motifs (from Interpro)
Interpro ID Name
 IPR014720  Double-stranded RNA-binding domain
 IPR032478  Staufen, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007281 germ cell development IMP
 molecular_functionGO:0003723 RNA binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr