ENSGALG00000004736


Gallus gallus

Features
Gene ID: ENSGALG00000004736
  
Biological name :STAU1
  
Synonyms : double-stranded RNA-binding protein Staufen homolog 1 / STAU1
  
Possible biological names infered from orthology : O95793 / Q9Z108 / staufen double-stranded RNA binding protein 1
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 6626330
Gene end: 6649773
  
Corresponding Affymetrix probe sets: Gga.12446.1.S1_s_at (Chicken Array)   Gga.17237.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007531
Ensembl peptide - ENSGALP00000007529
NCBI entrez gene - 419213     See in Manteia.
RefSeq - NM_001012831
RefSeq Peptide - NP_001012849
swissprot - F1NHD1
swissprot - F1NHE0
Ensembl - ENSGALG00000004736
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stau1ENSDARG00000044182Danio rerio
 STAU1ENSG00000124214Homo sapiens
 Stau1ENSMUSG00000039536Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STAU2 / double-stranded RNA-binding protein Staufen homolog 2 / Q8CJ67* / Q9NUL3* / staufen double-stranded RNA binding protein 2*ENSGALG0000003139044


Protein motifs (from Interpro)
Interpro ID Name
 IPR014720  Double-stranded RNA-binding domain
 IPR032478  Staufen, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045070 positive regulation of viral genome replication IEA
 biological_processGO:0046726 positive regulation by virus of viral protein levels in host cell IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 cellular_componentGO:0044297 cell body IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr