ENSDARG00000044261


Danio rerio

Features
Gene ID: ENSDARG00000044261
  
Biological name :si:ch211-243g18.2
  
Synonyms : si:ch211-243g18.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 9550419
Gene end: 9571012
  
Corresponding Affymetrix probe sets: Dr.9236.1.A1_at (Zebrafish Array)   Dr.9236.2.A1_at (Zebrafish Array)   Dr.9236.2.A1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000031042
Ensembl peptide - ENSDARP00000064976
Ensembl peptide - ENSDARP00000120495
NCBI entrez gene - 559906     See in Manteia.
RefSeq - NM_001044910
RefSeq - XM_021479182
RefSeq Peptide - NP_001038375
swissprot - Q1LXV4
swissprot - Q1LXV5
swissprot - F6P9S6
ZFIN ID - ZDB-GENE-030131-2830
Ensembl - ENSDARG00000044261
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
krt1-c5 / keratin, type 1, gene c5ENSDARG0000002697972
krt18 / Q7ZTS4 / keratin 18 / P05783* / P05784* / Keratin, type I cytoskeletal 18 *ENSDARG0000001840436
zgc:92380 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000004133933
zgc:171226 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000004497333
si:ch211-133j6.3 / KRT18 (1 of many) / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000005833233
zgc:110712 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000001936533
zgc:77517 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000002861832
wu:fk65c09ENSDARG0000006904630


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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