ENSDARG00000041339


Danio rerio

Features
Gene ID: ENSDARG00000041339
  
Biological name :zgc:92380
  
Synonyms : zgc:92380
  
Possible biological names infered from orthology : keratin 18 / Keratin, type I cytoskeletal 18 / KRT18 / P05783 / P05784
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 48007081
Gene end: 48039964
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000090608
Ensembl peptide - ENSDARP00000060592
NCBI entrez gene - 445086     See in Manteia.
RefSeq - NM_001003480
RefSeq - XM_009304971
RefSeq Peptide - NP_001003480
swissprot - Q6DBU4
swissprot - E7FAL7
ZFIN ID - ZDB-GENE-040801-221
Ensembl - ENSDARG00000041339
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KRT18ENSG00000111057Homo sapiens
 Krt18ENSMUSG00000023043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
krt18 / Q7ZTS4 / keratin 18 / P05783* / P05784* / Keratin, type I cytoskeletal 18 *ENSDARG0000001840436
zgc:77517 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000002861833
zgc:110712 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000001936530
zgc:171226 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000004497330
krt1-c5 / keratin, type 1, gene c5ENSDARG0000002697929
si:ch211-133j6.3 / KRT18 (1 of many) / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000005833229
si:ch211-243g18.2ENSDARG0000004426128
wu:fk65c09ENSDARG0000006904624


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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