ENSDARG00000019365


Danio rerio

Features
Gene ID: ENSDARG00000019365
  
Biological name :zgc:110712
  
Synonyms : zgc:110712
  
Possible biological names infered from orthology : B1AQ75 / keratin 20 / keratin 31 / keratin 32 / keratin 33A / keratin 33B / keratin 34 / keratin 35 / keratin 36 / keratin 37 / keratin 38 / keratin 39 / keratin 40 / Keratin, type I cuticular Ha1 / Keratin, type I cuticular Ha3-I / Keratin, type I cuticular Ha3-II / Keratin, type I cuticular Ha4 / Keratin, type I cuticular Ha5 / Keratin, type I cuticular Ha6 / Keratin, type I cytoskeletal 20 / Keratin, type I cytoskeletal 39 / Keratin, type I cytoskeletal 40 / KRT20 / KRT31 / KRT32 / KRT33A / KRT33B / KRT34 / KRT35 / KRT36 / KRT37 / KRT38 / KRT39 / KRT40 / O76009 / O76011 / O76013 / O76014 / O76015 / P35900 / Q14525 / Q14532 / Q15323 / Q497I4 / Q61765 / Q61897 / Q6A162 / Q6A163 / Q6IFX3 / Q6IFX4 / Q8K0Y2 / Q92764 / Q9D312 / Q9D646
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 11565996
Gene end: 11575070
  
Corresponding Affymetrix probe sets: Dr.1923.1.S1_at (Zebrafish Array)   NM_001017588_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121430
NCBI entrez gene - 550250     See in Manteia.
RefSeq - NM_001017588
RefSeq Peptide - NP_001017588
swissprot - A5WUY5
ZFIN ID - ZDB-GENE-050417-50
Ensembl - ENSDARG00000019365
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KRT20ENSGALG00000019716Gallus gallus
 KRT20ENSG00000171431Homo sapiens
 KRT31ENSG00000094796Homo sapiens
 KRT32ENSG00000108759Homo sapiens
 KRT33AENSG00000006059Homo sapiens
 KRT33BENSG00000131738Homo sapiens
 KRT34ENSG00000131737Homo sapiens
 KRT35ENSG00000197079Homo sapiens
 KRT36ENSG00000126337Homo sapiens
 KRT37ENSG00000108417Homo sapiens
 KRT38ENSG00000171360Homo sapiens
 KRT39ENSG00000196859Homo sapiens
 KRT40ENSG00000204889Homo sapiens
 Krt20ENSMUSG00000035775Mus musculus
 Krt31ENSMUSG00000048981Mus musculus
 Krt32ENSMUSG00000046095Mus musculus
 Krt33aENSMUSG00000035592Mus musculus
 Krt33bENSMUSG00000057723Mus musculus
 Krt34ENSMUSG00000043485Mus musculus
 Krt35ENSMUSG00000048013Mus musculus
 Krt36ENSMUSG00000020916Mus musculus
 Krt39ENSMUSG00000064165Mus musculus
 Krt40ENSMUSG00000059169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:171226 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000004497335
krt18 / Q7ZTS4 / keratin 18 / P05783* / P05784* / Keratin, type I cytoskeletal 18 *ENSDARG0000001840434
zgc:92380 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000004133933
krt1-c5 / keratin, type 1, gene c5ENSDARG0000002697933
si:ch211-243g18.2ENSDARG0000004426131
si:ch211-133j6.3 / KRT18 (1 of many) / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000005833229
zgc:77517 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000002861828
wu:fk65c09ENSDARG0000006904627


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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