ENSG00000204889


Homo sapiens

Features
Gene ID: ENSG00000204889
  
Biological name :KRT40
  
Synonyms : keratin 40 / KRT40 / Q6A162
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.2
Gene start: 40977716
Gene end: 40987135
  
Corresponding Affymetrix probe sets: 1562628_at (Human Genome U133 Plus 2.0 Array)   1562629_a_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000366984
Ensembl peptide - ENSP00000381500
Ensembl peptide - ENSP00000434458
NCBI entrez gene - 125115     See in Manteia.
OMIM - 616679
RefSeq - XM_017024189
RefSeq - NM_182497
RefSeq - XM_011524339
RefSeq Peptide - NP_872303
swissprot - Q6A162
swissprot - G3V1C2
Ensembl - ENSG00000204889
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:110712ENSDARG00000019365Danio rerio
 zgc:171226ENSDARG00000044973Danio rerio
 Krt40ENSMUSG00000059169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT35 / Q92764 / keratin 35ENSG0000019707959
KRT32 / Q14532 / keratin 32ENSG0000010875958
KRT36 / O76013 / keratin 36ENSG0000012633758
KRT31 / Q15323 / keratin 31ENSG0000009479657
KRT34 / O76011 / keratin 34ENSG0000013173757
KRT33A / O76009 / keratin 33AENSG0000000605957
KRT33B / Q14525 / keratin 33BENSG0000013173856
KRT39 / Q6A163 / keratin 39ENSG0000019685949
KRT38 / O76015 / keratin 38ENSG0000017136049
KRT37 / O76014 / keratin 37ENSG0000010841748
KRT20 / P35900 / keratin 20ENSG0000017143138
KRT18 / P05783 / keratin 18ENSG0000011105733


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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