ENSG00000171431


Homo sapiens

Features
Gene ID: ENSG00000171431
  
Biological name :KRT20
  
Synonyms : keratin 20 / KRT20 / P35900
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.2
Gene start: 40875941
Gene end: 40885227
  
Corresponding Affymetrix probe sets: 213953_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000167588
NCBI entrez gene - 54474     See in Manteia.
OMIM - 608218
RefSeq - NM_019010
RefSeq Peptide - NP_061883
swissprot - P35900
Ensembl - ENSG00000171431
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:110712ENSDARG00000019365Danio rerio
 zgc:171226ENSDARG00000044973Danio rerio
 KRT20ENSGALG00000019716Gallus gallus
 Krt20ENSMUSG00000035775Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRT36 / O76013 / keratin 36ENSG0000012633745
KRT18 / P05783 / keratin 18ENSG0000011105743
KRT35 / Q92764 / keratin 35ENSG0000019707941
KRT33A / O76009 / keratin 33AENSG0000000605940
KRT32 / Q14532 / keratin 32ENSG0000010875940
KRT34 / O76011 / keratin 34ENSG0000013173740
KRT31 / Q15323 / keratin 31ENSG0000009479640
KRT33B / Q14525 / keratin 33BENSG0000013173840
KRT40 / Q6A162 / keratin 40ENSG0000020488938
KRT39 / Q6A163 / keratin 39ENSG0000019685938
KRT38 / O76015 / keratin 38ENSG0000017136037
KRT37 / O76014 / keratin 37ENSG0000010841736


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0009267 cellular response to starvation IEA
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0045109 intermediate filament organization IEA
 biological_processGO:0050708 regulation of protein secretion IEA
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament NAS
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton NAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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