ENSDARG00000044400


Danio rerio

Features
Gene ID: ENSDARG00000044400
  
Biological name :wdr78
  
Synonyms : wdr78 / WD repeat domain 78
  
Possible biological names infered from orthology : E9PYY5 / Q5VTH9
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 30689239
Gene end: 30701207
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065205
NCBI entrez gene - 553797     See in Manteia.
RefSeq - NM_001020759
RefSeq Peptide - NP_001018595
swissprot - F1QHZ6
ZFIN ID - ZDB-GENE-050522-322
Ensembl - ENSDARG00000044400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR78ENSGALG00000045792Gallus gallus
 WDR78ENSG00000152763Homo sapiens
 Wdr78ENSMUSG00000035126Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dnai1.2 / dynein, axonemal, intermediate chain 1, paralog 2 / DNAI1* / Dnaic1* / Q8C0M8* / Q9UI46* / dynein axonemal intermediate chain 1* / Dynein intermediate chain 1, axonemal *ENSDARG0000003878819
dnai1.1 / dynein, axonemal, intermediate chain 1, paralog 1 / DNAI1* / Dnaic1* / Q8C0M8* / Q9UI46* / dynein axonemal intermediate chain 1* / Dynein intermediate chain 1, axonemal *ENSDARG0000010008118
dync1i2a / dynein, cytoplasmic 1, intermediate chain 2a / Q13409* / O88487* / DYNC1I2* / dynein cytoplasmic 1 intermediate chain 2* / Mus musculus dynein cytoplasmic 1 intermediate chain 2 ...ENSDARG0000007838616
dync1i2b / dynein, cytoplasmic 1, intermediate chain 2b / Q13409* / DYNC1I2* / dynein cytoplasmic 1 intermediate chain 2*ENSDARG0000010319516
dync1i1 / dynein, cytoplasmic 1, intermediate chain 1 / O14576* / O88485* / Cytoplasmic dynein 1 intermediate chain 1 *ENSDARG0000006094815
wdr34 / WD repeat domain 34 / Q96EX3*ENSDARG0000005763513
dnai2a / dynein, axonemal, intermediate chain 2aENSDARG0000010028512
dnai2b / dynein, axonemal, intermediate chain 2b / DNAI2* / Q9GZS0* / dynein axonemal intermediate chain 2*ENSDARG0000007408112


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003341 cilium movement IBA
 cellular_componentGO:0005858 axonemal dynein complex IBA
 molecular_functionGO:0008574 ATP-dependent microtubule motor activity, plus-end-directed IBA
 molecular_functionGO:0045503 dynein light chain binding IBA
 molecular_functionGO:0045504 dynein heavy chain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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