ENSDARG00000044769


Danio rerio

Features
Gene ID: ENSDARG00000044769
  
Biological name :kctd13
  
Synonyms : A9ULR9 / kctd13 / potassium channel tetramerization domain containing 13
  
Possible biological names infered from orthology : potassium channel tetramerisation domain containing 13 / Q8BGV7 / Q8WZ19
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 15213980
Gene end: 15227666
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065806
NCBI entrez gene - 100000647     See in Manteia.
RefSeq - NM_001077151
RefSeq Peptide - NP_001070619
swissprot - A9ULR9
ZFIN ID - ZDB-GENE-060825-162
Ensembl - ENSDARG00000044769
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCTD13ENSG00000174943Homo sapiens
 Kctd13ENSMUSG00000030685Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kctd10 / potassium channel tetramerization domain containing 10 / Q9H3F6*ENSDARG0000001711558
tnfaip1 / tumor necrosis factor, alpha-induced protein 1 (endothelial) / O70479* / Q13829* / TNF alpha induced protein 1*ENSDARG0000004156552
kctd14 / potassium channel tetramerization domain containing 14 / Q9BQ13*ENSDARG0000011024017
kctd7 / potassium channel tetramerization domain containing 7 / Q8BJK1* / Q96MP8* / BTB/POZ domain-containing protein KCTD7 *ENSDARG0000006158016


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR011333  SKP1/BTB/POZ domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 biological_processGO:0021952 central nervous system projection neuron axonogenesis IMP
 biological_processGO:0035024 negative regulation of Rho protein signal transduction IMP
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0060322 head development IMP
 biological_processGO:0061351 neural precursor cell proliferation IMP
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain neuron increased amount , abnormal
brain morphology , abnormal
Show

 ZFA:0000029 hindbrain hindbrain axon decreased length , abnormal
hindbrain axon disorganized , abnormal
Show

 ZFA:0000079 telencephalon telencephalon hypoplastic , abnormal
Show

 ZFA:0000101 diencephalon diencephalon hypoplastic , abnormal
Show

 ZFA:0000107 eye eye increased distance eye , abnormal
Show

 ZFA:0000109 forebrain forebrain asymmetrical , abnormal
forebrain neuron increased amount , abnormal
forebrain axon decreased size , abnormal
forebrain axon disorganized , abnormal
Show

 ZFA:0000128 midbrain midbrain hypoplastic , abnormal
Show

 ZFA:0000445 optic tectum optic tectum decreased amount , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased amount , abnormal
Show

 ZFA:0001114 head head increased size , abnormal
Show

 ZFA:0001261 ventricular system ventricular system decreased size , abnormal
ventricular system morphology , abnormal
Show

 ZFA:0001682 white matter white matter spatial pattern , abnormal
Show

 ZFA:0009310 retinal ganglion cell retinal ganglion cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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