ENSDARG00000041565


Danio rerio

Features
Gene ID: ENSDARG00000041565
  
Biological name :tnfaip1
  
Synonyms : tnfaip1 / tumor necrosis factor, alpha-induced protein 1 (endothelial)
  
Possible biological names infered from orthology : O70479 / Q13829 / TNF alpha induced protein 1
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 20529197
Gene end: 20541185
  
Corresponding Affymetrix probe sets: Dr.11474.1.S1_at (Zebrafish Array)   NM_199799_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116264
Ensembl peptide - ENSDARP00000153764
Ensembl peptide - ENSDARP00000124995
Ensembl peptide - ENSDARP00000060934
Ensembl peptide - ENSDARP00000115718
NCBI entrez gene - 327399     See in Manteia.
RefSeq - NM_199799
RefSeq - XM_021481342
RefSeq Peptide - NP_956093
swissprot - F8W5S3
swissprot - E9QJI2
swissprot - E9QC35
swissprot - F1R5K5
ZFIN ID - ZDB-GENE-030131-5610
Ensembl - ENSDARG00000041565
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNFAIP1ENSGALG00000005715Gallus gallus
 Q13829ENSG00000109079Homo sapiens
 O70479ENSMUSG00000017615Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kctd10 / potassium channel tetramerization domain containing 10 / Q9H3F6*ENSDARG0000001711564
kctd13 / A9ULR9 / potassium channel tetramerization domain containing 13 / Q8WZ19* / Q8BGV7* / potassium channel tetramerisation domain containing 13*ENSDARG0000004476953
kctd7 / potassium channel tetramerization domain containing 7 / Q8BJK1* / Q96MP8* / BTB/POZ domain-containing protein KCTD7 *ENSDARG0000006158016
kctd14 / potassium channel tetramerization domain containing 14 / Q9BQ13*ENSDARG0000011024014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR011333  SKP1/BTB/POZ domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051260 protein homooligomerization IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr