ENSDARG00000045371


Danio rerio

Features
Gene ID: ENSDARG00000045371
  
Biological name :prdm14
  
Synonyms : prdm14 / PR domain containing 14
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 14451404
Gene end: 14456103
  
Corresponding Affymetrix probe sets: Dr.17647.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000110909
Ensembl peptide - ENSDARP00000066719
NCBI entrez gene - 563151     See in Manteia.
RefSeq - NM_001163831
RefSeq Peptide - NP_001157303
swissprot - F1RER2
swissprot - F1QWQ9
ZFIN ID - ZDB-GENE-030131-2709
Ensembl - ENSDARG00000045371
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000033439Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
prdm4 / PR domain containing 4 / RTCB* / Q99LF4* / Q80V63* / Q9UKN5* / Q9Y3I0* / PR/SET domain 4* / PR domain zinc finger protein 4 * / tRNA-splicing ligase RtcB homolog * / RNA 2,3-cyclic ...ENSDARG0000001736617
prdm12b / PR domain containing 12b / PRDM12* / Q9H4Q4* / PR/SET domain 12*ENSDARG0000000743017


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IMP
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009243 CaP motoneuron CaP motoneuron axon decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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