ENSDARG00000046006


Danio rerio

Features
Gene ID: ENSDARG00000046006
  
Biological name :med20
  
Synonyms : med20 / mediator complex subunit 20 / Q6DBX1
  
Possible biological names infered from orthology : Gm20517 / Mediator of RNA polymerase II transcription subunit 20 / Q9H944 / Q9R0X0
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 558287
Gene end: 567923
  
Corresponding Affymetrix probe sets: Dr.23717.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117412
Ensembl peptide - ENSDARP00000146689
NCBI entrez gene - 445191     See in Manteia.
RefSeq - XM_009295755
swissprot - F1QNU6
swissprot - Q6DBX1
ZFIN ID - ZDB-GENE-040801-104
Ensembl - ENSDARG00000046006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED20ENSGALG00000003474Gallus gallus
 MED20ENSG00000124641Homo sapiens
 Gm20517ENSMUSG00000023984Mus musculus
 Med20ENSMUSG00000092558Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013921  Mediator complex, subunit Med20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IBA
 molecular_functionGO:0003713 transcription coactivator activity IBA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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