ENSGALG00000003474


Gallus gallus

Features
Gene ID: ENSGALG00000003474
  
Biological name :MED20
  
Synonyms : MED20 / Mediator of RNA polymerase II transcription subunit 20 / Q5ZKY9
  
Possible biological names infered from orthology : Gm20517 / mediator complex subunit 20 / Q9H944 / Q9R0X0
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 5021879
Gene end: 5026730
  
Corresponding Affymetrix probe sets: Gga.7432.1.S1_at (Chicken Array)   GgaAffx.12048.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005490
Ensembl peptide - ENSGALP00000064450
Ensembl peptide - ENSGALP00000063258
Ensembl peptide - ENSGALP00000050316
Ensembl peptide - ENSGALP00000049023
NCBI entrez gene - 419926     See in Manteia.
RefSeq - XM_015298951
RefSeq - NM_001006327
RefSeq Peptide - NP_001006327
swissprot - A0A1D5PC31
swissprot - A0A1D5P8H5
swissprot - A0A1L1S017
swissprot - Q5ZKY9
swissprot - A0A1L1RWP0
Ensembl - ENSGALG00000003474
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 med20ENSDARG00000046006Danio rerio
 MED20ENSG00000124641Homo sapiens
 Gm20517ENSMUSG00000023984Mus musculus
 Med20ENSMUSG00000092558Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013921  Mediator complex, subunit Med20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IEA
 molecular_functionGO:0003713 transcription coactivator activity IBA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr