ENSDARG00000046024


Danio rerio

Features
Gene ID: ENSDARG00000046024
  
Biological name :pym1
  
Synonyms : pym1 / PYM homolog 1, exon junction complex associated factor / Q6PH11
  
Possible biological names infered from orthology : Partner of Y14 and mago / Q8CHP5 / Q9BRP8
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 387622
Gene end: 389507
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136874
swissprot - Q6PH11
ZFIN ID - ZDB-GENE-040426-1464
Ensembl - ENSDARG00000046024
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PYM1ENSGALG00000046169Gallus gallus
 PYM1ENSG00000170473Homo sapiens
 Pym1ENSMUSG00000064030Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015362  WIBG, Mago-binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ISS
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0045727 positive regulation of translation ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0035145 exon-exon junction complex ISS
 molecular_functionGO:0043022 ribosome binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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