ENSG00000170473


Homo sapiens

Features
Gene ID: ENSG00000170473
  
Biological name :PYM1
  
Synonyms : PYM1 / PYM homolog 1, exon junction complex associated factor / Q9BRP8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.2
Gene start: 55901413
Gene end: 55932618
  
Corresponding Affymetrix probe sets: 224465_s_at (Human Genome U133 Plus 2.0 Array)   242304_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000448858
Ensembl peptide - ENSP00000452291
Ensembl peptide - ENSP00000452447
Ensembl peptide - ENSP00000381271
Ensembl peptide - ENSP00000386156
Ensembl peptide - ENSP00000402829
NCBI entrez gene - 84305     See in Manteia.
RefSeq - NM_032345
RefSeq - NM_001143853
RefSeq Peptide - NP_001137325
RefSeq Peptide - NP_115721
swissprot - Q9BRP8
swissprot - F8VT68
swissprot - F8VXH2
swissprot - G3V5P2
swissprot - H0YJW5
Ensembl - ENSG00000170473
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pym1ENSDARG00000046024Danio rerio
 PYM1ENSGALG00000046169Gallus gallus
 Pym1ENSMUSG00000064030Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015362  WIBG, Mago-binding
 IPR036348  WIBG, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0045727 positive regulation of translation IDA
 biological_processGO:1903259 exon-exon junction complex disassembly IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0030054 cell junction IDA
 cellular_componentGO:0035145 exon-exon junction complex IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043022 ribosome binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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