ENSMUSG00000064030


Mus musculus

Features
Gene ID: ENSMUSG00000064030
  
Biological name :Pym1
  
Synonyms : Partner of Y14 and mago / Pym1 / Q8CHP5
  
Possible biological names infered from orthology : PYM homolog 1, exon junction complex associated factor / Q9BRP8
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: D3
Gene start: 128747889
Gene end: 128766564
  
Corresponding Affymetrix probe sets: 10367393 (MoGene1.0st)   1453315_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000067623
Ensembl peptide - ENSMUSP00000129789
Ensembl peptide - ENSMUSP00000151691
NCBI entrez gene - 78428     See in Manteia.
MGI - MGI:1925678
RefSeq - XM_006514322
RefSeq - NM_001170869
RefSeq - NM_001253704
RefSeq - NM_001253705
RefSeq - NM_030100
RefSeq Peptide - NP_001164340
RefSeq Peptide - NP_001240633
RefSeq Peptide - NP_001240634
RefSeq Peptide - NP_084376
swissprot - Q8CHP5
swissprot - A0A1W2P7L0
Ensembl - ENSMUSG00000064030
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pym1ENSDARG00000046024Danio rerio
 PYM1ENSGALG00000046169Gallus gallus
 PYM1ENSG00000170473Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015362  WIBG, Mago-binding
 IPR036348  WIBG, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ISS
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0045727 positive regulation of translation ISO
 biological_processGO:1903259 exon-exon junction complex disassembly ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0030054 cell junction ISO
 cellular_componentGO:0035145 exon-exon junction complex ISS
 molecular_functionGO:0043022 ribosome binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr