ENSDARG00000052121
Danio rerio | |
Features
| Gene ID: | ENSDARG00000052121 | | | | | Biological name : | rag2 | | | | | Synonyms : | rag2 / recombination activating gene 2 | | | | | Possible biological names infered from orthology : | P21784 / P55895 / recombination activating 2 | | | | | Species: | Danio rerio | | | | | Chr. number: | 25 | | Strand: | -1 | | Band: | | | Gene start: | 9010425 | | Gene end: | 9013963 | | | | | Corresponding Affymetrix probe sets: | Dr.5743.1.S1_at (Zebrafish Array) NM_131385_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000068402
NCBI entrez gene - 30658
See in Manteia.
RefSeq - NM_131385
RefSeq Peptide - NP_571460
swissprot - Q1RLW7
ZFIN ID - ZDB-GENE-990415-235
Ensembl - ENSDARG00000052121
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
No match
Protein motifs (from Interpro)
| IPR004321 | V-D-J recombination activating protein 2 | | IPR011011 | Zinc finger, FYVE/PHD-type | | IPR011043 | Galactose oxidase/kelch, beta-propeller | | IPR013083 | Zinc finger, RING/FYVE/PHD-type | | IPR015915 | Kelch-type beta propeller | | IPR025162 | Recombination activating protein 2, PHD domain |
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000669 | head kidney | head kidney lymphocyte decreased amount , abnormal
head kidney T cell decreased amount , abnormal
head kidney mature B cell decreased amount , abnormal |
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| | ZFA:0001078 | thymus | thymus morphology , abnormal
thymus has fewer parts of type T cell , abnormal
thymus has extra parts of type fat cell , abnormal
thymus decreased size , abnormal |
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| | ZFA:0001094 | whole organism | whole organism neoplastic , abnormal
whole organism melanoma increased occurrence , abnormal
whole organism neuroblastoma increased occurrence , abnormal
whole organism Lymphoid neoplasms increased occurrence , abnormal
whole organism embryonal rhabdomyosarcoma increased occurrence , abnormal
whole organism sterile , abnormal
whole organism decreased life span , abnormal |
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| | ZFA:0005779 | thymic epithelium | thymic epithelium has fewer parts of type epithelial cell , abnormal |
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| | ZFA:0009250 | lymphocyte | lymphocyte decreased amount , abnormal |
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Interacting proteins (from Reactome)
No match
1 s.
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