ENSDARG00000053010


Danio rerio

Features
Gene ID: ENSDARG00000053010
  
Biological name :lpcat2
  
Synonyms : lpcat2 / lysophosphatidylcholine acyltransferase 2
  
Possible biological names infered from orthology : Lpcat2b / Lysophosphatidylcholine acyltransferase 2B / Q7L5N7 / Q8BYI6 / Q9D5U0
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 35385472
Gene end: 35409027
  
Corresponding Affymetrix probe sets: Dr.14414.1.A1_at (Zebrafish Array)   Dr.14414.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111397
Ensembl peptide - ENSDARP00000069449
Ensembl peptide - ENSDARP00000142850
NCBI entrez gene - 553683     See in Manteia.
swissprot - A0A1D5NSN3
swissprot - F1Q8S6
ZFIN ID - ZDB-GENE-050522-229
Ensembl - ENSDARG00000053010
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPCAT2ENSGALG00000003574Gallus gallus
 LPCAT2ENSG00000087253Homo sapiens
 Lpcat2ENSMUSG00000033192Mus musculus
 Q9D5U0ENSMUSG00000033794Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpcat1 / Q1LWG4 / lysophosphatidylcholine acyltransferase 1 / Q3TFD2* / Q8NF37*ENSDARG0000001150641
lpcat4 / lysophosphatidylcholine acyltransferase 4 / Q643R3* / Q6NVG1* / Lysophospholipid acyltransferase LPCAT4 *ENSDARG0000003502832
LO017917.1 / LPCAT1* / Q8NF37* / lysophosphatidylcholine acyltransferase 1*ENSDARG0000011565115


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR002123  Phospholipid/glycerol acyltransferase
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodelling of PC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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