ENSDARG00000011506


Danio rerio

Features
Gene ID: ENSDARG00000011506
  
Biological name :lpcat1
  
Synonyms : lpcat1 / lysophosphatidylcholine acyltransferase 1 / Q1LWG4
  
Possible biological names infered from orthology : Q3TFD2 / Q8NF37
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 28291062
Gene end: 28334164
  
Corresponding Affymetrix probe sets: Dr.17371.1.A1_at (Zebrafish Array)   NM_001044341_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094631
Ensembl peptide - ENSDARP00000125791
Ensembl peptide - ENSDARP00000133893
Ensembl peptide - ENSDARP00000120048
Ensembl peptide - ENSDARP00000125633
NCBI entrez gene - 555969     See in Manteia.
RefSeq - NM_001044341
RefSeq Peptide - NP_001037806
swissprot - I3IRX4
swissprot - I3ISB9
swissprot - J9JI14
swissprot - Q1LWG4
ZFIN ID - ZDB-GENE-060503-915
Ensembl - ENSDARG00000011506
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPCAT1ENSGALG00000013189Gallus gallus
 LPCAT1ENSG00000153395Homo sapiens
 Lpcat1ENSMUSG00000021608Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpcat2 / lysophosphatidylcholine acyltransferase 2 / Q9D5U0* / Q7L5N7* / Q8BYI6* / Lpcat2b* / Lysophosphatidylcholine acyltransferase 2B *ENSDARG0000005301042
lpcat4 / lysophosphatidylcholine acyltransferase 4 / Q643R3* / Q6NVG1* / Lysophospholipid acyltransferase LPCAT4 *ENSDARG0000003502833
LO017917.1 / LPCAT1* / Q8NF37* / lysophosphatidylcholine acyltransferase 1*ENSDARG0000011565121


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR002123  Phospholipid/glycerol acyltransferase
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006644 phospholipid metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008654 phospholipid biosynthetic process ISS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus ISS
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0047184 1-acylglycerophosphocholine O-acyltransferase activity ISS
 molecular_functionGO:0047192 1-alkylglycerophosphocholine O-acetyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodelling of PC
Acyl chain remodelling of PG
Synthesis of PA
Synthesis of PC
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000097718 stard10 / StAR-related lipid transfer (START) domain containing 10 / Q9Y365* / Q9JMD3* / START domain containing 10* / StAR related lipid transfer domain containing 10*  / reaction / complex






 

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