ENSGALG00000013189


Gallus gallus

Features
Gene ID: ENSGALG00000013189
  
Biological name :LPCAT1
  
Synonyms : LPCAT1 / lysophosphatidylcholine acyltransferase 1
  
Possible biological names infered from orthology : Q3TFD2 / Q8NF37
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 86095769
Gene end: 86157882
  
Corresponding Affymetrix probe sets: Gga.16935.1.S1_at (Chicken Array)   GgaAffx.8398.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021516
NCBI entrez gene - 420974     See in Manteia.
RefSeq - XM_004935171
RefSeq - XM_015282336
RefSeq - XM_419059
swissprot - F1NME3
Ensembl - ENSGALG00000013189
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO017917.1ENSDARG00000115651Danio rerio
 lpcat1ENSDARG00000011506Danio rerio
 LPCAT1ENSG00000153395Homo sapiens
 Lpcat1ENSMUSG00000021608Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LPCAT2 / lysophosphatidylcholine acyltransferase 2 / Q9D5U0* / Q7L5N7* / Q8BYI6* / Lpcat2b* / Lysophosphatidylcholine acyltransferase 2B *ENSGALG0000000357443


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR002123  Phospholipid/glycerol acyltransferase
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008654 phospholipid biosynthetic process IEA
 biological_processGO:0036151 phosphatidylcholine acyl-chain remodeling IEA
 biological_processGO:0043129 surfactant homeostasis IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:2001246 negative regulation of phosphatidylcholine biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0047159 1-alkenylglycerophosphocholine O-acyltransferase activity IEA
 molecular_functionGO:0047184 1-acylglycerophosphocholine O-acyltransferase activity IEA
 molecular_functionGO:0047191 1-alkylglycerophosphocholine O-acyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodelling of PC
Acyl chain remodelling of PG
Synthesis of PA
Synthesis of PC
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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