ENSDARG00000053246


Danio rerio

Features
Gene ID: ENSDARG00000053246
  
Biological name :si:ch211-11i22.4
  
Synonyms : si:ch211-11i22.4
  
Possible biological names infered from orthology : DEPDC7 / DEP domain containing 7 / DEP domain-containing protein 7 / Q91WS7 / Q96QD5
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 5972690
Gene end: 5982502
  
Corresponding Affymetrix probe sets: Dr.9494.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000067516
NCBI entrez gene - 337546     See in Manteia.
RefSeq - XM_684969
swissprot - F1R0C6
ZFIN ID - ZDB-GENE-030131-9492
Ensembl - ENSDARG00000053246
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DEPDC7ENSGALG00000011681Gallus gallus
 DEPDC7ENSG00000121690Homo sapiens
 Depdc7ENSMUSG00000027173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
depdc7 / DEP domain containing 7 / Q96QD5*ENSDARG0000005504341
si:ch211-265o23.1 / DEPDC4* / Q8N2C3* / DEP domain containing 4*ENSDARG0000008990832
depdc1a / DEP domain containing 1a / DEPDC1* / Q5TB30* / Q8CIG0* / DEP domain containing 1* / DEP domain-containing protein 1A *ENSDARG0000001816518


Protein motifs (from Interpro)
Interpro ID Name
 IPR000591  DEP domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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