ENSDARG00000018165


Danio rerio

Features
Gene ID: ENSDARG00000018165
  
Biological name :depdc1a
  
Synonyms : depdc1a / DEP domain containing 1a
  
Possible biological names infered from orthology : DEPDC1 / DEP domain containing 1 / DEP domain-containing protein 1A / Q5TB30 / Q8CIG0
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 16710634
Gene end: 16725959
  
Corresponding Affymetrix probe sets: Dr.1694.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000049675
Ensembl peptide - ENSDARP00000152474
NCBI entrez gene - 100003959     See in Manteia.
swissprot - A9C3R7
ZFIN ID - ZDB-GENE-030131-9827
Ensembl - ENSDARG00000018165
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DEPDC1ENSGALG00000011275Gallus gallus
 DEPDC1ENSG00000024526Homo sapiens
 Q8CIG0ENSMUSG00000028175Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-265o23.1 / DEPDC4* / Q8N2C3* / DEP domain containing 4*ENSDARG0000008990815
depdc7 / DEP domain containing 7 / Q96QD5*ENSDARG0000005504313
si:ch211-11i22.4 / DEPDC7* / Q91WS7* / Q96QD5* / DEP domain containing 7* / DEP domain-containing protein 7 *ENSDARG0000005324613


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR000591  DEP domain
 IPR008936  Rho GTPase activation protein
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr