ENSMUSG00000028175


Mus musculus

Features
Gene ID: ENSMUSG00000028175
  
Biological name :Depdc1a
  
Synonyms : Depdc1a / DEP domain-containing protein 1A / Q8CIG0
  
Possible biological names infered from orthology : DEPDC1 / DEP domain containing 1 / Q5TB30
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: H4
Gene start: 159495433
Gene end: 159529955
  
Corresponding Affymetrix probe sets: 10497122 (MoGene1.0st)   10563883 (MoGene1.0st)   1424292_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029825
Ensembl peptide - ENSMUSP00000101656
Ensembl peptide - ENSMUSP00000113216
NCBI entrez gene - 76131     See in Manteia.
MGI - MGI:1923381
RefSeq - NM_001172092
RefSeq - NM_001172093
RefSeq - NM_029523
RefSeq Peptide - NP_001165563
RefSeq Peptide - NP_001165564
RefSeq Peptide - NP_083799
swissprot - Q8CIG0
swissprot - D3Z6J1
Ensembl - ENSMUSG00000028175
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 depdc1aENSDARG00000018165Danio rerio
 DEPDC1ENSGALG00000011275Gallus gallus
 DEPDC1ENSG00000024526Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BH88 / Depdc1b / DEP domain-containing protein 1B / Q8WUY9* / DEP domain containing 1B*ENSMUSG0000002169733
Depdc7 / Q91WS7 / DEP domain-containing protein 7 / Q96QD5* / DEP domain containing 7*ENSMUSG0000002717313


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR000591  DEP domain
 IPR008936  Rho GTPase activation protein
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0017053 transcriptional repressor complex IBA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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