ENSDARG00000054063


Danio rerio

Features
Gene ID: ENSDARG00000054063
  
Biological name :arpc4
  
Synonyms : actin related protein 2/3 complex, subunit 4 / arpc4 / arpc4l
  
Possible biological names infered from orthology : P59998 / P59999
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 40743367
Gene end: 40778294
  
Corresponding Affymetrix probe sets: Dr.13393.1.S1_at (Zebrafish Array)   NM_205537_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000155849
Ensembl peptide - ENSDARP00000025212
Ensembl peptide - ENSDARP00000115888
NCBI entrez gene - 445305     See in Manteia.
NCBI entrez gene - 114456     See in Manteia.
RefSeq - NM_205537
RefSeq Peptide - NP_001003762
RefSeq Peptide - NP_991100
swissprot - E9QJ46
swissprot - Q6NZZ2
ZFIN ID - ZDB-GENE-010724-9
ZFIN ID - ZDB-GENE-040808-18
Ensembl - ENSDARG00000054063
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARPC4ENSGALG00000006691Gallus gallus
 ARPC4ENSG00000241553Homo sapiens
 Arpc4ENSMUSG00000079426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arpc4l / actin related protein 2/3 complex, subunit 4, like / ARPC4* / P59998* / P59999* / actin related protein 2/3 complex subunit 4*ENSDARG0000005822587


Protein motifs (from Interpro)
Interpro ID Name
 IPR008384  Actin-related protein 2/3 complex subunit 4
 IPR034666  Arp2/3 complex subunit 2/4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030041 actin filament polymerization IEA
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 biological_processGO:0034314 Arp2/3 complex-mediated actin nucleation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005885 Arp2/3 protein complex IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
EPHB-mediated forward signaling
RHO GTPases Activate WASPs and WAVEs
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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