ENSDARG00000054343


Danio rerio

Features
Gene ID: ENSDARG00000054343
  
Biological name :slc7a8b
  
Synonyms : slc7a8b / solute carrier family 7 (amino acid transporter light chain, L system), member 8b
  
Possible biological names infered from orthology : Q9QXW9 / Q9UHI5 / SLC7A8 / solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 / solute carrier family 7 member 8
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 38318000
Gene end: 38337122
  
Corresponding Affymetrix probe sets: Dr.22315.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000070995
Ensembl peptide - ENSDARP00000148437
swissprot - F1QYD9
ZFIN ID - ZDB-GENE-030616-586
Ensembl - ENSDARG00000054343
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9UHI5ENSG00000092068Homo sapiens
 Q9QXW9ENSMUSG00000022180Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc7a8a / solute carrier family 7 (amino acid transporter light chain, L system), member 8a / Q9UHI5* / SLC7A8* / Q9QXW9* / solute carrier family 7 member 8* / solute carrier family 7 (cati...ENSDARG0000007583179
slc7a10a / solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a / Q9NS82* / P63115* / SLC7A10* / solute carrier family 7 member 10* / solute carrier ...ENSDARG0000000810063
slc7a10b / solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b / Q9NS82* / P63115* / SLC7A10* / solute carrier family 7 member 10* / solute carrier ...ENSDARG0000005173062
slc7a5 / solute carrier family 7 (amino acid transporter light chain, L system), member 5 / Q9Z127* / Q01650* / solute carrier family 7 member 5* / solute carrier family 7 (cationic amino a...ENSDARG0000009926549
slc7a6 / solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 / Q92536* / Q8BGK6* / solute carrier family 7 member 6* / Mus musculus solute carrier family 7 (c...ENSDARG0000005442348
slc7a7 / solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 / Q9Z1K8* / Q9UM01* / Y+L amino acid transporter 1 * / solute carrier family 7 member 7*ENSDARG0000005522645
si:dkeyp-120h9.1ENSDARG0000002027843
slc7a11 / solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 / Q9WTR6* / Q9UPY5* / solute carrier family 7 member 11* / solute carrier family 7 (cat...ENSDARG0000007138442
slc7a9 / solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 / Q9QXA6* / P82251* / solute carrier family 7 member 9* / solute carrier family 7 (cationic amin...ENSDARG0000000589438
si:ch73-352p4.8ENSDARG0000004061037
zmp:0000001267ENSDARG0000008919234


Protein motifs (from Interpro)
Interpro ID Name
 IPR002293  Amino acid/polyamine transporter I
 IPR004760  L-type amino acid transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006865 amino acid transport IEA
 biological_processGO:0015804 neutral amino acid transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902475 L-alpha-amino acid transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015175 neutral amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015179 L-amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015297 antiporter activity IBA
 molecular_functionGO:0022857 transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Basigin interactions
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000037012 slc3a2b / solute carrier family 3 (amino acid transporter heavy chain), member 2b / P08195* / SLC3A2* / solute carrier family 3 member 2*  / complex
 ENSDARG00000036427 slc3a2a / solute carrier family 3 (amino acid transporter heavy chain), member 2a / P10852* / SLC3A2* / P08195* / solute carrier family 3 member 2* / solute carrier family 3 (activators of ...  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr