ENSDARG00000054543


Danio rerio

Features
Gene ID: ENSDARG00000054543
  
Biological name :samsn1a
  
Synonyms : SAM domain, SH3 domain and nuclear localisation signals 1a / samsn1a
  
Possible biological names infered from orthology : P57725 / Q9NSI8 / SAM domain-containing protein SAMSN-1 / SAM domain, SH3 domain and nuclear localization signals 1 / SAMSN1
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 29564364
Gene end: 29586747
  
Corresponding Affymetrix probe sets: Dr.19983.1.S1_at (Zebrafish Array)   Dr.919.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071220
Ensembl peptide - ENSDARP00000090720
NCBI entrez gene - 336695     See in Manteia.
RefSeq - XM_021481348
RefSeq Peptide - NP_001122141
swissprot - F1QR70
swissprot - B3DH22
ZFIN ID - ZDB-GENE-030131-8639
Ensembl - ENSDARG00000054543
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMSN1ENSGALG00000040926Gallus gallus
 Q9NSI8ENSG00000155307Homo sapiens
 P57725ENSMUSG00000022876Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
samsn1b / SAM domain, SH3 domain and nuclear localisation signals 1b / Q9NSI8* / SAMSN1* / P57725* / SAM domain-containing protein SAMSN-1 * / SAM domain, SH3 domain and nuclear localizatio...ENSDARG0000007864729
sash1a / SAM and SH3 domain containing 1a / SASH1* / O94885* / SAM and SH3 domain containing 1*ENSDARG0000000717924
sash1b / SAM and SH3 domain containing 1b / SASH1* / O94885* / SAM and SH3 domain containing 1*ENSDARG0000005885323
sash3 / SAM and SH3 domain containing 3 / O75995* / Q8K352* / SAM and SH3 domain-containing protein 3 *ENSDARG0000001654119


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021090  SAM/SH3 domain-containing


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr