ENSDARG00000078647


Danio rerio

Features
Gene ID: ENSDARG00000078647
  
Biological name :samsn1b
  
Synonyms : SAM domain, SH3 domain and nuclear localisation signals 1b / samsn1b
  
Possible biological names infered from orthology : P57725 / Q9NSI8 / SAM domain-containing protein SAMSN-1 / SAM domain, SH3 domain and nuclear localization signals 1 / SAMSN1
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 38417512
Gene end: 38428094
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100602
NCBI entrez gene - 450018     See in Manteia.
RefSeq - NM_001006039
RefSeq Peptide - NP_001006039
swissprot - F1RBX4
ZFIN ID - ZDB-GENE-041010-135
Ensembl - ENSDARG00000078647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMSN1ENSGALG00000040926Gallus gallus
 Q9NSI8ENSG00000155307Homo sapiens
 P57725ENSMUSG00000022876Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
samsn1a / SAM domain, SH3 domain and nuclear localisation signals 1a / Q9NSI8* / SAMSN1* / P57725* / SAM domain-containing protein SAMSN-1 * / SAM domain, SH3 domain and nuclear localizatio...ENSDARG0000005454351
sash1a / SAM and SH3 domain containing 1a / SASH1* / O94885* / SAM and SH3 domain containing 1*ENSDARG0000000717940
sash1b / SAM and SH3 domain containing 1b / SASH1* / O94885* / SAM and SH3 domain containing 1*ENSDARG0000005885339
sash3 / SAM and SH3 domain containing 3 / O75995* / Q8K352* / SAM and SH3 domain-containing protein 3 *ENSDARG0000001654138


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021090  SAM/SH3 domain-containing


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr