ENSDARG00000054849


Danio rerio

Features
Gene ID: ENSDARG00000054849
  
Biological name :bcat2
  
Synonyms : bcat2 / branched chain amino-acid transaminase 2, mitochondrial
  
Possible biological names infered from orthology : Branched-chain-amino-acid aminotransferase, mitochondrial / branched chain amino acid transaminase 2 / O15382 / O35855
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 29949984
Gene end: 29968055
  
Corresponding Affymetrix probe sets: Dr.4325.1.A1_at (Zebrafish Array)   NM_001002676_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116059
Ensembl peptide - ENSDARP00000122776
Ensembl peptide - ENSDARP00000071587
NCBI entrez gene - 436949     See in Manteia.
RefSeq - NM_001002676
RefSeq - NM_001309527
RefSeq Peptide - NP_001002676
RefSeq Peptide - NP_001296456
swissprot - F1QLF8
swissprot - E9QCQ6
swissprot - E9QFU8
ZFIN ID - ZDB-GENE-040718-425
Ensembl - ENSDARG00000054849
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BCAT2ENSG00000105552Homo sapiens
 Bcat2ENSMUSG00000030826Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bcat1 / branched chain amino-acid transaminase 1, cytosolic / P24288* / P54687* / branched chain amino acid transaminase 1* / Branched-chain-amino-acid aminotransferase, cytosolic *ENSDARG0000004556861


Protein motifs (from Interpro)
Interpro ID Name
 IPR001544  Aminotransferase class IV
 IPR005786  Branched-chain amino acid aminotransferase II
 IPR018300  Aminotransferase, class IV, conserved site
 IPR033939  Branched-chain aminotransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0009081 branched-chain amino acid metabolic process IEA
 biological_processGO:0009082 branched-chain amino acid biosynthetic process IEA
 biological_processGO:0009098 leucine biosynthetic process IBA
 biological_processGO:0009099 valine biosynthetic process IBA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004084 branched-chain-amino-acid transaminase activity IBA
 molecular_functionGO:0008483 transaminase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0052654 L-leucine transaminase activity IEA
 molecular_functionGO:0052655 L-valine transaminase activity IEA
 molecular_functionGO:0052656 L-isoleucine transaminase activity IEA


Pathways (from Reactome)
Pathway description
Branched-chain amino acid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000054849 bcat2 / branched chain amino-acid transaminase 2, mitochondrial / O15382* / O35855* / branched chain amino acid transaminase 2* / Branched-chain-amino-acid aminotransferase, mitochondrial *  / complex






 

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