ENSDARG00000055463


Danio rerio

Features
Gene ID: ENSDARG00000055463
  
Biological name :lrit3a
  
Synonyms : info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a / lrit3a
  
Possible biological names infered from orthology : leucine rich repeat, Ig-like and transmembrane domains 3 / Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 / LRIT3 / Q3SXY7 / W8DXL4
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 36328425
Gene end: 36345175
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000072289
NCBI entrez gene - 558559     See in Manteia.
swissprot - B3DK88
ZFIN ID - ZDB-GENE-080723-63
Ensembl - ENSDARG00000055463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRIT3ENSGALG00000026627Gallus gallus
 LRIT3ENSG00000183423Homo sapiens
 Lrit3ENSMUSG00000093865Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrit1a / leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a / LRIT1* / Q8K099* / Q9P2V4* / leucine rich repeat, Ig-like and transmembrane domains 1* / Leucine-rich repeat...ENSDARG0000001917937
lrit1b / leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b / LRIT1* / Q9P2V4* / leucine rich repeat, Ig-like and transmembrane domains 1*ENSDARG0000009940636
lrit3b / leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b / LRIT3* / Q3SXY7* / W8DXL4* / leucine rich repeat, Ig-like and transmembrane domains 3* / Leucine-rich repeat...ENSDARG0000005705431
lrit2 / leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 / A6NDA9* / Q6PFC5* / leucine rich repeat, Ig-like and transmembrane domains 2* / Leucine-rich repeat, immunoglo...ENSDARG0000003062624
islr2 / immunoglobulin superfamily containing leucine-rich repeat 2 / ISLR* / O14498* / Q5RKR3* / Q6GU68* / Q6UXK2* / immunoglobulin superfamily containing leucine rich repeat* / Immunoglob...ENSDARG0000005187518


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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