ENSDARG00000055472


Danio rerio

Features
Gene ID: ENSDARG00000055472
  
Biological name :nubp1
  
Synonyms : nubp1 / nucleotide binding protein 1 (MinD homolog, E. coli)
  
Possible biological names infered from orthology : Cytosolic Fe-S cluster assembly factor NUBP1 / nucleotide binding protein 1 / P53384 / Q9R060
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 26931710
Gene end: 26978793
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129550
NCBI entrez gene - 503919     See in Manteia.
RefSeq - NM_001017538
RefSeq Peptide - NP_001017538
swissprot - A0A0R4I9D1
ZFIN ID - ZDB-GENE-050417-471
Ensembl - ENSDARG00000055472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUBP1ENSGALG00000007241Gallus gallus
 NUBP1ENSG00000103274Homo sapiens
 Nubp1ENSMUSG00000022503Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nubpl / nucleotide binding protein-like / Q8TB37* / Q9CWD8* / Iron-sulfur protein NUBPL *ENSDARG0000005482136


Protein motifs (from Interpro)
Interpro ID Name
 IPR019591  Mrp/NBP35 ATP-binding protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR028601  Cytosolic Fe-S cluster assembly factor NUBP1/Nbp35
 IPR033756  Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016226 iron-sulfur cluster assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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