ENSDARG00000055475


Danio rerio

Features
Gene ID: ENSDARG00000055475
  
Biological name :rps27.2
  
Synonyms : ribosomal protein S27, isoform 2 / rps27.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 23788616
Gene end: 23800484
  
Corresponding Affymetrix probe sets: Dr.14110.1.A1_at (Zebrafish Array)   NM_200765_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113389
Ensembl peptide - ENSDARP00000072300
NCBI entrez gene - 393738     See in Manteia.
RefSeq - NM_200765
RefSeq Peptide - NP_957059
swissprot - E9QFY8
swissprot - Q6PBT1
ZFIN ID - ZDB-GENE-040426-1735
Ensembl - ENSDARG00000055475
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rps27.1 / ribosomal protein S27, isoform 1ENSDARG0000002329899
CABZ01079011.1 / RPS27* / P42677* / ribosomal protein S27*ENSDARG0000010051389


Protein motifs (from Interpro)
Interpro ID Name
 IPR000592  Ribosomal protein S27e
 IPR011332  Zinc-binding ribosomal protein
 IPR023407  Ribosomal protein S27e, zinc-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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