Manteia

ENSDARG00000100513

Danio rerio

Features

Gene ID:	ENSDARG00000100513

Biological name :	CABZ01079011.1

Synonyms :	CABZ01079011.1

Possible biological names infered from orthology :	40S ribosomal protein S27 / P42677 / Q6ZWU9 / ribosomal protein S27 / ribosomal protein S27, retrogene / RPS27 / Rps27rt

Species:	Danio rerio

Chr. number:	25
Strand:	1
Band:
Gene start:	34641536
Gene end:	34650374

Corresponding Affymetrix probe sets:	Dr.7787.1.S1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000140190 swissprot - A0A0R4IYD0 Ensembl - ENSDARG00000100513

See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rps27.1 / ribosomal protein S27, isoform 1	ENSDARG00000023298	90
rps27.2 / ribosomal protein S27, isoform 2	ENSDARG00000055475	89

Protein motifs (from Interpro)

Interpro ID	Name
IPR000592	Ribosomal protein S27e
IPR011332	Zinc-binding ribosomal protein
IPR023407	Ribosomal protein S27e, zinc-binding domain superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006412	translation	IEA
cellular_component	GO:0005622	intracellular	IEA
cellular_component	GO:0005840	ribosome	IEA
molecular_function	GO:0003735	structural constituent of ribosome	IEA
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr