ENSMUSG00000090733


Mus musculus

Features
Gene ID: ENSMUSG00000090733
  
Biological name :Rps27
  
Synonyms : 40S ribosomal protein S27 / Q6ZWU9 / Rps27
  
Possible biological names infered from orthology : P42677 / ribosomal protein S27
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F1
Gene start: 90212522
Gene end: 90213651
  
Corresponding Affymetrix probe sets: 10499748 (MoGene1.0st)   10597490 (MoGene1.0st)   10338232 (MoGene1.0st)   10339822 (MoGene1.0st)   10340193 (MoGene1.0st)   10340245 (MoGene1.0st)   10340618 (MoGene1.0st)   10340957 (MoGene1.0st)   10343282 (MoGene1.0st)   1415716_a_at (Mouse Genome 430 2.0 Array)   1460699_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000132102
Ensembl peptide - ENSMUSP00000143402
Ensembl peptide - ENSMUSP00000142942
Ensembl peptide - ENSMUSP00000142536
NCBI entrez gene - 57294     See in Manteia.
MGI - MGI:1888676
RefSeq - NM_027015
RefSeq Peptide - NP_081291
swissprot - A0A0G2JEX7
swissprot - A0A0G2JDW7
swissprot - A0A0G2JG29
swissprot - Q6ZWU9
Ensembl - ENSMUSG00000090733
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01079011.1ENSDARG00000100513Danio rerio
 RPS27ENSGALG00000037441Gallus gallus
 RPS27ENSG00000177954Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6ZWU9 / Rps27rt / ribosomal protein S27, retrogeneENSMUSG00000050621100
Q6ZWY3 / Rps27l / ribosomal protein S27-like / Q71UM5*ENSMUSG0000003678189


Protein motifs (from Interpro)
Interpro ID Name
 IPR000592  Ribosomal protein S27e
 IPR011332  Zinc-binding ribosomal protein
 IPR023407  Ribosomal protein S27e, zinc-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000028 ribosomal small subunit assembly IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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