ENSDARG00000055622


Danio rerio

Features
Gene ID: ENSDARG00000055622
  
Biological name :zgc:153345
  
Synonyms : zgc:153345
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 33393829
Gene end: 33403522
  
Corresponding Affymetrix probe sets: Dr.6070.1.A1_at (Zebrafish Array)   NM_001077613_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000101589
Ensembl peptide - ENSDARP00000138086
NCBI entrez gene - 566129     See in Manteia.
RefSeq - NM_001077613
RefSeq Peptide - NP_001071081
swissprot - F1RAC8
swissprot - A0A0R4IRT8
ZFIN ID - ZDB-GENE-061103-487
Ensembl - ENSDARG00000055622
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arhgap11a / Rho GTPase activating protein 11A / Q3KRB8* / Q6P4F7* / Q80Y19* / ARHGAP11B* / AC091057.5* / Rho GTPase activating protein 11B*ENSDARG0000010001919
arhgap36 / Rho GTPase activating protein 36ENSDARG000000596729
stard13a / StAR-related lipid transfer (START) domain containing 13a / Q9Y3M8* / Q923Q2* / STARD13* / StAR-related lipid transfer protein 13 * / StAR related lipid transfer domain containing 13*ENSDARG000000795427
si:dkeyp-23e4.3ENSDARG000000748197
stard13b / StAR-related lipid transfer (START) domain containing 13b / Q9Y3M8* / Q923Q2* / STARD13* / StAR-related lipid transfer protein 13 * / StAR related lipid transfer domain containing 13*ENSDARG000000989547
stard8 / StAR-related lipid transfer (START) domain containing 8 / Q92502* / Q8K031* / StAR-related lipid transfer protein 8 * / StAR related lipid transfer domain containing 8*ENSDARG000000140037
dlc1 / DLC1 Rho GTPase activating protein / Q96QB1*ENSDARG000000793177
arhgap18 / Rho GTPase activating protein 18 / Q8N392*ENSDARG000000747406
arhgap28 / Rho GTPase activating protein 28 / Q9P2N2*ENSDARG000001013506


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR008936  Rho GTPase activation protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr