ENSDARG00000098954


Danio rerio

Features
Gene ID: ENSDARG00000098954
  
Biological name :stard13b
  
Synonyms : stard13b / StAR-related lipid transfer (START) domain containing 13b
  
Possible biological names infered from orthology : Q923Q2 / Q9Y3M8 / STARD13 / StAR related lipid transfer domain containing 13 / StAR-related lipid transfer protein 13
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 33467298
Gene end: 33640890
  
Corresponding Affymetrix probe sets: Dr.16386.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134729
Ensembl peptide - ENSDARP00000156207
Ensembl peptide - ENSDARP00000138606
Ensembl peptide - ENSDARP00000135603
NCBI entrez gene - 100005208     See in Manteia.
RefSeq - XM_005157638
swissprot - E7F8B8
swissprot - A0A0R4IW40
swissprot - A0A0R4IIH6
ZFIN ID - ZDB-GENE-050506-146
Ensembl - ENSDARG00000098954
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STARD13ENSGALG00000017065Gallus gallus
 Q9Y3M8ENSG00000133121Homo sapiens
 Q923Q2ENSMUSG00000016128Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stard13a / StAR-related lipid transfer (START) domain containing 13a / Q9Y3M8* / Q923Q2* / STARD13* / StAR-related lipid transfer protein 13 * / StAR related lipid transfer domain containing 13*ENSDARG0000007954254
stard8 / StAR-related lipid transfer (START) domain containing 8 / Q92502* / Q8K031* / StAR-related lipid transfer protein 8 * / StAR related lipid transfer domain containing 8*ENSDARG0000001400336
dlc1 / DLC1 Rho GTPase activating protein / Q96QB1*ENSDARG0000007931736
si:dkeyp-23e4.3ENSDARG0000007481929
arhgap18 / Rho GTPase activating protein 18 / Q8N392*ENSDARG000000747407
arhgap36 / Rho GTPase activating protein 36ENSDARG000000596726
arhgap11a / Rho GTPase activating protein 11A / Q3KRB8* / Q6P4F7* / Q80Y19* / ARHGAP11B* / AC091057.5* / Rho GTPase activating protein 11B*ENSDARG000001000196
zgc:153345ENSDARG000000556225
arhgap28 / Rho GTPase activating protein 28 / Q9P2N2*ENSDARG000001013504


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR001660  Sterile alpha motif domain
 IPR002913  START domain
 IPR008936  Rho GTPase activation protein
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR023393  START-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr