ENSDARG00000055791


Danio rerio

Features
Gene ID: ENSDARG00000055791
  
Biological name :zgc:158423
  
Synonyms : zgc:158423
  
Possible biological names infered from orthology : P08195 / P10852 / SLC3A2 / solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 / solute carrier family 3 member 2
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 20535869
Gene end: 20542545
  
Corresponding Affymetrix probe sets: Dr.22840.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000072643
NCBI entrez gene - 790938     See in Manteia.
RefSeq - NM_001080083
RefSeq Peptide - NP_001073552
swissprot - F1R3F0
ZFIN ID - ZDB-GENE-061215-58
Ensembl - ENSDARG00000055791
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P08195ENSG00000168003Homo sapiens
 P10852ENSMUSG00000010095Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc3a2a / solute carrier family 3 (amino acid transporter heavy chain), member 2a / P10852* / SLC3A2* / P08195* / solute carrier family 3 member 2* / solute carrier family 3 (activators of ...ENSDARG0000003642758
slc3a2b / solute carrier family 3 (amino acid transporter heavy chain), member 2b / P08195* / SLC3A2* / solute carrier family 3 member 2*ENSDARG0000003701241
slc3a1 / solute carrier family 3 (amino acid transporter heavy chain), member 1 / Q91WV7* / Q07837* / solute carrier family 3 member 1* / Neutral and basic amino acid transport protein rBAT *ENSDARG0000001716522
si:dkey-202g17.3ENSDARG0000005750421


Protein motifs (from Interpro)
Interpro ID Name
 IPR006047  Glycosyl hydrolase, family 13, catalytic domain
 IPR017853  Glycoside hydrolase superfamily
 IPR031984  Solute carrier family 3 member 2, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Basigin interactions
Amino acid transport across the plasma membrane
Tryptophan catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr