ENSDARG00000017165


Danio rerio

Features
Gene ID: ENSDARG00000017165
  
Biological name :slc3a1
  
Synonyms : slc3a1 / solute carrier family 3 (amino acid transporter heavy chain), member 1
  
Possible biological names infered from orthology : Neutral and basic amino acid transport protein rBAT / Q07837 / Q91WV7 / solute carrier family 3 member 1
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 10649069
Gene end: 10672538
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114538
NCBI entrez gene - 557757     See in Manteia.
swissprot - F1QEA9
ZFIN ID - ZDB-GENE-090313-225
Ensembl - ENSDARG00000017165
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC3A1ENSGALG00000009973Gallus gallus
 Q07837ENSG00000138079Homo sapiens
 Q91WV7ENSMUSG00000024131Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc3a2b / solute carrier family 3 (amino acid transporter heavy chain), member 2b / P08195* / SLC3A2* / solute carrier family 3 member 2*ENSDARG0000003701219
zgc:158423 / P10852* / SLC3A2* / P08195* / solute carrier family 3 member 2* / solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2*ENSDARG0000005579116
slc3a2a / solute carrier family 3 (amino acid transporter heavy chain), member 2a / P10852* / SLC3A2* / P08195* / solute carrier family 3 member 2* / solute carrier family 3 (activators of ...ENSDARG0000003642714
si:dkey-202g17.3ENSDARG0000005750414


Protein motifs (from Interpro)
Interpro ID Name
 IPR006047  Glycosyl hydrolase, family 13, catalytic domain
 IPR017853  Glycoside hydrolase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000005894 slc7a9 / solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 / Q9QXA6* / P82251* / solute carrier family 7 member 9* / solute carrier family 7 (cationic amin...  / complex






 

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contact: otassy@igbmc.fr