ENSDARG00000055855


Danio rerio

Features
Gene ID: ENSDARG00000055855
  
Biological name :kcnc3a
  
Synonyms : kcnc3a / potassium voltage-gated channel, Shaw-related subfamily, member 3a
  
Possible biological names infered from orthology : KCNC3 / potassium voltage-gated channel subfamily C member 3 / potassium voltage-gated channel subfamily C member 3 isoform 2 / Q14003
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 31953145
Gene end: 32053929
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124090
Ensembl peptide - ENSDARP00000138260
Ensembl peptide - ENSDARP00000124513
Ensembl peptide - ENSDARP00000072711
NCBI entrez gene - 559096     See in Manteia.
RefSeq - NM_001195240
RefSeq Peptide - NP_001182169
swissprot - E1AZA5
swissprot - E1AZA4
swissprot - F1Q4T8
ZFIN ID - ZDB-GENE-100901-1
Ensembl - ENSDARG00000055855
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCNC3ENSG00000131398Homo sapiens
 Kcnc3ENSMUSG00000062785Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kcnc3b / potassium voltage-gated channel, Shaw-related subfamily, member 3b / KCNC3* / Q14003* / potassium voltage-gated channel subfamily C member 3* / potassium voltage-gated channel subf...ENSDARG0000009881685
kcnc1a / potassium voltage-gated channel, Shaw-related subfamily, member 1a / KCNC1* / P15388* / P48547* / potassium voltage-gated channel subfamily C member 1*ENSDARG0000005185262
kcnc1b / potassium voltage-gated channel, Shaw-related subfamily, member 1b / KCNC1* / P15388* / P48547* / potassium voltage-gated channel subfamily C member 1*ENSDARG0000003295961
kcnc4 / potassium voltage-gated channel, Shaw-related subfamily, member 4 / Q03721* / Q8R1C0* / potassium voltage-gated channel subfamily C member 4*ENSDARG0000006128857
kcnc2 / potassium voltage-gated channel, Shaw-related subfamily, member 2 / Q14B80* / Q96PR1* / potassium voltage-gated channel subfamily C member 2*ENSDARG0000005746839
kcna2b / potassium voltage-gated channel, shaker-related subfamily, member 2b / KCNA2* / P16389* / potassium voltage-gated channel subfamily A member 2*ENSDARG0000010206428
si:ch73-334d15.4ENSDARG0000005650227
kcna4 / potassium voltage-gated channel, shaker-related subfamily, member 4 / P22459* / Q61423* / potassium voltage-gated channel subfamily A member 4*ENSDARG0000007865027
kcna1b / potassium voltage-gated channel, shaker-related subfamily, member 1b / KCNA1* / Q09470* / potassium voltage-gated channel subfamily A member 1*ENSDARG0000001710827
kcna2a / potassium voltage-gated channel, shaker-related subfamily, member 2a / KCNA2* / P16389* / potassium voltage-gated channel subfamily A member 2*ENSDARG0000000224127
kcna1a / potassium voltage-gated channel, shaker-related subfamily, member 1a / KCNA1* / P16388* / Q09470* / potassium voltage-gated channel subfamily A member 1*ENSDARG0000006294227
kcna6a / potassium voltage-gated channel, shaker-related, subfamily, member 6 a / KCNA7* / Q17ST2* / Q96RP8* / potassium voltage-gated channel subfamily A member 7*ENSDARG0000004601426
kcnd3 / potassium voltage-gated channel, Shal-related subfamily, member 3 / Q9UK17* / Q9Z0V1* / potassium voltage-gated channel subfamily D member 3* / potassium voltage-gated channel, Shal...ENSDARG0000005610125
kcnd1 / potassium voltage-gated channel, Shal-related subfamily, member 1 / Q03719* / Q9NSA2* / potassium voltage-gated channel subfamily D member 1*ENSDARG0000007474624
kcnd2 / potassium voltage-gated channel, Shal-related subfamily, member 2 / Q9NZV8* / Q9Z0V2* / potassium voltage-gated channel subfamily D member 2*ENSDARG0000003279924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR003968  Potassium channel, voltage dependent, Kv
 IPR003974  Potassium channel, voltage dependent, Kv3
 IPR005821  Ion transport domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR021105  Potassium channel, voltage dependent, Kv3, inactivation domain
 IPR028325  Voltage-gated potassium channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0008045 motor neuron axon guidance IMP
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0048666 neuron development IMP
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IDA
 molecular_functionGO:0005267 potassium channel activity IEA


Pathways (from Reactome)
Pathway description
Voltage gated Potassium channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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