ENSDARG00000056151


Danio rerio

Features
Gene ID: ENSDARG00000056151
  
Biological name :tyrp1b
  
Synonyms : tyrosinase-related protein 1b / tyrp1b
  
Possible biological names infered from orthology : P07147 / P17643 / tyrosinase related protein 1 / TYRP1
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 19332837
Gene end: 19346048
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073055
NCBI entrez gene - 437022     See in Manteia.
RefSeq - NM_001002749
RefSeq Peptide - NP_001002749
swissprot - Q6DGE4
ZFIN ID - ZDB-GENE-040718-249
Ensembl - ENSDARG00000056151
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TYRP1ENSGALG00000015205Gallus gallus
 TYRP1ENSG00000107165Homo sapiens
 Tyrp1ENSMUSG00000005994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tyrp1a / tyrosinase-related protein 1a / TYRP1* / P17643* / tyrosinase related protein 1*ENSDARG0000002920469
dct / dopachrome tautomerase / P29812* / P40126* / L-dopachrome tautomerase *ENSDARG0000000600845
tyr / tyrosinase / P14679*ENSDARG0000003907738


Protein motifs (from Interpro)
Interpro ID Name
 IPR002227  Tyrosinase copper-binding domain
 IPR008922  Uncharacterised domain, di-copper centre
 IPR015559  Putative tyrosinase-like, Tyr-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003406 retinal pigment epithelium development IGI
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030318 melanocyte differentiation IGI
 biological_processGO:0032438 melanosome organization IGI
 biological_processGO:0043473 pigmentation IGI
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0097066 response to thyroid hormone IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Melanin biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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