ENSDARG00000056334


Danio rerio

Features
Gene ID: ENSDARG00000056334
  
Biological name :mlh3
  
Synonyms : mlh3 / mutL homolog 3 (E. coli)
  
Possible biological names infered from orthology : mutL homolog 3 / Q9UHC1
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 24589633
Gene end: 24598877
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120332
swissprot - E9QGN2
ZFIN ID - ZDB-GENE-060810-45
Ensembl - ENSDARG00000056334
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MLH3ENSGALG00000010304Gallus gallus
 MLH3ENSG00000119684Homo sapiens
 Mlh3ENSMUSG00000021245Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003594  Histidine kinase/HSP90-like ATPase
 IPR013507  DNA mismatch repair protein, S5 domain 2-like
 IPR014721  Ribosomal protein S5 domain 2-type fold, subgroup
 IPR014790  MutL, C-terminal, dimerisation
 IPR020568  Ribosomal protein S5 domain 2-type fold
 IPR028830  DNA mismatch repair protein Mlh3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006298 mismatch repair IBA
 biological_processGO:0007131 reciprocal meiotic recombination IEA
 cellular_componentGO:0000795 synaptonemal complex IBA
 cellular_componentGO:0005712 chiasma IBA
 cellular_componentGO:0032300 mismatch repair complex IBA
 molecular_functionGO:0003697 single-stranded DNA binding IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IBA
 molecular_functionGO:0030983 mismatched DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr