ENSDARG00000056621
Danio rerio | |
Features
| Gene ID: | ENSDARG00000056621 | | | | | Biological name : | ctcf | | | | | Synonyms : | CCCTC-binding factor (zinc finger protein) / ctcf | | | | | Possible biological names infered from orthology : | CCCTC-binding factor / Mus musculus CCCTC-binding factor (Ctcf), transcript variant 2, mRNA. / P49711 / Q61164 | | | | | Species: | Danio rerio | | | | | Chr. number: | 18 | | Strand: | 1 | | Band: | | | Gene start: | 22285992 | | Gene end: | 22295064 | | | | | Corresponding Affymetrix probe sets: | | | | | | Cross references: | Ensembl peptide - ENSDARP00000126345
Ensembl peptide - ENSDARP00000126341
Ensembl peptide - ENSDARP00000157452
Ensembl peptide - ENSDARP00000073595
NCBI entrez gene - 415104
See in Manteia.
RefSeq - NM_001001844
RefSeq Peptide - NP_001001844
swissprot - K7DY15
swissprot - K7DY19
swissprot - Q6JAA4
ZFIN ID - ZDB-GENE-040624-5
Ensembl - ENSDARG00000056621
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| ZNF335 / si:ch211-269m15.3 / A2A5K6* / Zfp335* / Q9H4Z2* / zinc finger protein 335* | ENSDARG00000076920 | 16 | | zfp64 / zinc finger protein 64 homolog (mouse) / Q9NPA5* / Q9NTW7* / ZFP64 zinc finger protein* | ENSDARG00000061147 | 15 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000107 | eye | eye decreased size , abnormal |
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| | ZFA:0000112 | gut | gut quality , abnormal |
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| | ZFA:0000123 | liver | liver quality , abnormal
liver aplastic , abnormal |
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| | ZFA:0001094 | whole organism | whole organism morphology , abnormal
whole organism bent , abnormal |
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| | ZFA:0001114 | head | head decreased size , abnormal |
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| | ZFA:0001117 | post-vent region | post-vent region curved dorsal , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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